MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1120c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1120c (family_assigned) — hypothetical protein Rv1120c Rv1119c (family_assigned) — hypothetical protein Rv1119c Rv1118c (requalified) — hypothetical protein Rv1118c Rv0891c (family_assigned) — hypothetical protein Rv0891c Rv1359 (family_assigned) — transcriptional regulator Rv1359 zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1 gnd2 (requalified) — decarboxylating 6-phosphogluconate dehydrogenase gnd2 prrB (requalified) — two-component system sensor histidine kinase PrrB prrB Rv2434c (requalified) — mechanosensitive ion channel Rv2434c Rv1780 (family_assigned) — hypothetical protein Rv1780 Rv3371 (requalified) — diacylglycerol O-acyltransferase Rv3371 Rv3091 (family_assigned) — patatin-like phospholipase family protein Rv3091 Rv3239c (requalified) — MFS transporter Rv3239c Rv0073 (family_assigned) — ATP-binding cassette domain-containing protein Rv0073 lppW (family_assigned) — hypothetical protein lppW dosT (requalified) — two-component system sensor histidine kinase DosT dosT devS (requalified) — two-component system sensor histidine kinase DevS devS Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv0890c (family_assigned) — HTH-type transcriptional regulator Rv0890c citA (requalified) — citrate synthase 2 citA cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3840 (family_assigned) — transcriptional regulator Rv3840 devB (requalified) — 6-phosphogluconolactonase devB pgi (requalified) — glucose-6-phosphate isomerase pgi gnd1 (requalified) — 6-phosphogluconate dehydrogenase gnd1 zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap rpiB (requalified) — ribose-5-phosphate isomerase B rpiB rpe (requalified) — ribulose-phosphate 3-epimerase rpe prrA (requalified) — two-component system response regulator PrrA prrA trcR (requalified) — two-component system response regulator TrcR trcR phoP (requalified) — two-component system response regulator PhoP phoP tcrX (requalified) — two-component system response regulator TcrX tcrX mprA (requalified) — two-component system response regulator MprA mprA regX3 (requalified) — two component sensory transduction protein RegX regX3 Rv2435c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv2435c nrtS (requalified) — nitrate/nitrite transporter NrtS nrtS Rv2432c (dark) — hypothetical protein Rv2432c Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv0386 (family_assigned) — LuxR family transcriptional regulator Rv0386 Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c Rv2342 (family_assigned) — hypothetical protein Rv2342

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.