MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1115 · 46 genes shown · anchor vapB32 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1115 (family_assigned) — hypothetical protein Rv1115 Rv1116 (dark) — hypothetical protein Rv1116 vapB32 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB32 vapC32 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC32 Rv1111c (family_assigned) — DUF6542 domain-containing protein Rv1111c Rv3094c (family_assigned) — acyl-CoA dehydrogenase family protein Rv3094c Rv0987 (family_assigned) — FtsX-like permease family protein Rv0987 Rv1500 (family_assigned) — glycosyltransferase family 2 protein Rv1500 mgtC (family_assigned) — MgtC/SapB family protein mgtC Rv1145 (requalified) — transmembrane transport protein Rv1145 vapB47 (requalified) — antitoxin VapB47 vapB47 eccC4 (family_assigned) — type VII secretion system ESX-4 FtsK/SpoIIIE famil eccC4 Rv0104 (family_assigned) — cyclic nucleotide-binding domain-containing protei Rv0104 mazF1 (requalified) — toxin MazF1 mazF1 egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE PE22 (family_assigned) — PE family protein PE22 PE22 lsr2 (requalified) — histone-like nucleoid-structuring protein Lsr2 lsr2 ychF (requalified) — redox-regulated ATPase YchF ychF Rv0366c (family_assigned) — zeta toxin family protein Rv0366c vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3909 (dark) — hypothetical protein Rv3909 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv3093c (requalified) — LLM class F420-dependent oxidoreductase Rv3093c Rv3095 (family_assigned) — helix-turn-helix domain-containing protein Rv3095 fadB (requalified) — fatty oxidation protein FadB fadB Rv3092c (family_assigned) — DUF808 domain-containing protein Rv3092c fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA Rv0988 (family_assigned) — lipocalin-like domain-containing protein Rv0988 Rv0986 (family_assigned) — ABC transporter ATP-binding protein Rv0986 clpB (requalified) — chaperone protein ClpB clpB moeW (family_assigned) — ThiF family adenylyltransferase moeW mscL (requalified) — large-conductance mechanosensitive channel protein mscL glnQ (family_assigned) — ATP-binding cassette domain-containing protein glnQ Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv1502 (family_assigned) — hypothetical protein Rv1502 Rv1503c (family_assigned) — Conserved hypothetical protein Rv1503c Rv1504c (family_assigned) — Conserved hypothetical protein Rv1504c Rv1499 (requalified) — glycosyltransferase (part1) Rv1499 Rv1507c (family_assigned) — WbqC family protein Rv1507c Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.