MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1097c · 28 genes shown · anchor fum · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1097c (family_assigned) — hypothetical protein Rv1097c fum (requalified) — class II fumarate hydratase fum glpX (requalified) — class II fructose-bisphosphatase glpX Rv1100 (family_assigned) — hypothetical protein Rv1100 sigF (requalified) — RNA polymerase sigma factor SigF sigF sdhA (family_assigned) — succinate dehydrogenase flavoprotein subunit sdhA frdA (family_assigned) — fumarate reductase (quinol) flavoprotein subunit frdA Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c mdh (requalified) — malate dehydrogenase mdh Rv0247c (family_assigned) — succinate dehydrogenase/fumarate reductase iron-su Rv0247c sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB tkt (requalified) — transketolase tkt fba (requalified) — class II fructose-bisphosphate aldolase fba tal (requalified) — transaldolase tal pfkA (requalified) — ATP-dependent 6-phosphofructokinase pfkA pgi (requalified) — glucose-6-phosphate isomerase pgi manA (requalified) — mannose-6-phosphate isomerase%2C class I manA Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 Rv1019 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1019 Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv1610 (family_assigned) — TIGR02234 family membrane protein Rv1610 rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC usfY (family_assigned) — hypothetical protein usfY rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.