MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1096 · 46 genes shown · anchor phoH2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1096 (family_assigned) — polysaccharide deacetylase family protein Rv1096 mftF (requalified) — mycofactocin biosynthesis glycosyltransferase MftF mftF phoH2 (family_assigned) — PhoH family protein phoH2 aftD (family_assigned) — DUF3367 domain-containing protein aftD aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB fmt (requalified) — methionyl-tRNA formyltransferase fmt Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c celA1 (requalified) — cellulase CelA celA1 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1887 (family_assigned) — hypothetical protein Rv1887 Rv2688c (family_assigned) — ABC transporter ATP-binding protein Rv2688c bglS (requalified) — beta-glucosidase BglS bglS cysA2 (requalified) — sulfurtransferase cysA2 mftE (requalified) — mycofactocin biosynthesis peptidyl-dipeptidase Mft mftE mftG (family_assigned) — mycofactocin system GMC family oxidoreductase MftG mftG mftC (requalified) — mycofactocin radical SAM maturase mftC mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftD (requalified) — pre-mycofactocin synthase MftD mftD mftR (family_assigned) — mycofactocin system transcriptional regulator mftR rne (family_assigned) — Rne/Rng family ribonuclease rne desA2 (requalified) — acyl-ACP desaturase desA2 Rv0513 (family_assigned) — DUF3093 domain-containing protein Rv0513 Rv0528 (requalified) — cytochrome c biogenesis protein ResB Rv0528 napA (requalified) — DUF3263 domain-containing protein napA aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv0227c (family_assigned) — membrane protein Rv0227c ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv3807c (requalified) — decaprenylphosphoryl-5-phosphoribose phosphatase Rv3807c fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA Rv3802c (requalified) — phospholipase Rv3802c glfT2 (requalified) — galactofuranosyl transferase GlfT2 glfT2 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD dfrA (requalified) — dihydrofolate reductase dfrA gcvT (requalified) — aminomethyltransferase gcvT metH (requalified) — methionine synthase metH purN (requalified) — phosphoribosylglycinamide formyltransferase purN Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP nusB (requalified) — transcription antitermination factor NusB nusB Rv3402c (family_assigned) — DegT/DnrJ/EryC1/StrS family aminotransferase Rv3402c priA (family_assigned) — primosomal protein N' priA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.