MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1092c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
coaA (requalified) — pantothenate kinase coaA dfp (requalified) — bifunctional phosphopantothenoylcysteine decarboxy dfp panC (requalified) — pantoate--beta-alanine ligase panC kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB Rv3600c (requalified) — type III pantothenate kinase Rv3600c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c glyA1 (requalified) — serine hydroxymethyltransferase glyA1 dprE1 (requalified) — decaprenylphospho-beta-D-ribofuranose 2-dehydrogen dprE1 coaE (requalified) — dephospho-CoA kinase coaE def (requalified) — peptide deformylase def oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS mmpL2 (requalified) — RND transporter MmpL2 mmpL2 mce3F (family_assigned) — MlaD family protein mce3F rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ gmk (requalified) — guanylate kinase gmk panD (requalified) — aspartate 1-decarboxylase panD panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 rsmD (requalified) — 16S rRNA (guanine(966)-N(2))-methyltransferase Rsm rsmD ribF (requalified) — bifunctional riboflavin kinase /FMN adenylyltransf ribF Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB gcvT (requalified) — aminomethyltransferase gcvT purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD purN (requalified) — phosphoribosylglycinamide formyltransferase purN gcvH (requalified) — glycine cleavage system protein GcvH gcvH dprE2 (requalified) — decaprenylphosphoryl-D-2-keto erythropentose reduc dprE2 Rv3789 (requalified) — arabinogalactan biosynthesis protein Rv3789 embC (requalified) — arabinosyltransferase EmbC embC aftA (requalified) — galactan 5-O-arabinofuranosyltransferase aftA ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA embA (requalified) — arabinosyltransferase EmbA embA acpS (requalified) — holo-ACP synthase acpS rpsA (requalified) — 30S ribosomal protein S1 rpsA polA (requalified) — DNA polymerase I polA Rv1870c (family_assigned) — hypothetical protein Rv1870c rnhB (requalified) — ribonuclease HII rnhB rplU (requalified) — 50S ribosomal protein L21 rplU tig (requalified) — trigger factor tig

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.