MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1088 · 45 genes shown · anchor PE10 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE9 (family_assigned) — PE family protein PE9 PE9 PE10 (family_assigned) — PE family protein PE10 PE10 Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A panC (requalified) — pantoate--beta-alanine ligase panC Rv0992c (requalified) — 5-formyltetrahydrofolate cyclo-ligase Rv0992c Rv2205c (requalified) — glycerate kinase Rv2205c ripC (requalified) — peptidoglycan hydrolase RipC ripC PE_PGRS13 (family_assigned) — PE-PGRS family protein PE_PGRS13 PE_PGRS13 PE_PGRS37 (family_assigned) — PE-PGRS family protein PE_PGRS37 PE_PGRS37 PE_PGRS11 (family_assigned) — PE-PGRS family protein PE_PGRS11 PE_PGRS11 Rv1115 (family_assigned) — hypothetical protein Rv1115 PE34 (family_assigned) — PE family protein PE34 PE34 PE_PGRS60 (family_assigned) — PE-PGRS family-related protein PE_PGRS60 PE_PGRS60 PE27A (family_assigned) — PE family protein PE27A PE27A PE_PGRS56 (family_assigned) — PE-PGRS family protein PE_PGRS56 PE_PGRS56 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA proS (requalified) — proline--tRNA ligase proS dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr Rv2256c (dark) — hypothetical protein Rv2256c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 nusA (requalified) — transcription termination factor NusA nusA panD (requalified) — aspartate 1-decarboxylase panD Rv3600c (requalified) — type III pantothenate kinase Rv3600c panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv3603c (family_assigned) — Rossmann-like and DUF2520 domain-containing protei Rv3603c gadB (requalified) — glutamate decarboxylase gadB Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 purN (requalified) — phosphoribosylglycinamide formyltransferase purN folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT Rv0991c (family_assigned) — FmdB family zinc ribbon protein Rv0991c galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU moeA1 (requalified) — molybdopterin molybdenumtransferase 1 moeA1 aldA (requalified) — aldehyde dehydrogenase aldA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c Rv2189c (dark) — hypothetical protein Rv2189c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA Rv0175 (family_assigned) — hypothetical protein Rv0175 pimB (requalified) — GDP-mannose-dependent alpha-(1-6)-phosphatidylinos pimB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.