MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1087 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS21 (family_assigned) — PE-PGRS family protein PE_PGRS21 PE_PGRS21 Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 Rv1087A (family_assigned) — Conserved hypothetical protein Rv1087A zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 pknD (requalified) — serine/threonine protein kinase PknD pknD lppD (requalified) — lipoprotein LppD lppD cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA PPE58 (family_assigned) — PPE family protein PPE58 PPE58 PE_PGRS49 (family_assigned) — PE-PGRS family protein PE_PGRS49 PE_PGRS49 Rv0311 (family_assigned) — hypothetical protein Rv0311 PPE53 (family_assigned) — PPE family protein PPE53 PPE53 galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb embR (requalified) — response regulator transcription factor EmbR embR idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA proS (requalified) — proline--tRNA ligase proS dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr Rv2256c (dark) — hypothetical protein Rv2256c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 nusA (requalified) — transcription termination factor NusA nusA omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pstS2 (family_assigned) — phosphate ABC transporter substrate-binding lipopr pstS2 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB qcrC (requalified) — cytochrome c qcrC Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 garA (requalified) — glycogen accumulation regulator GarA garA lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ cobB (requalified) — NAD-dependent protein deacylase cobB cinA (requalified) — competence/damage-inducible protein A cinA Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c Rv0143c (requalified) — chloride channel protein Rv0143c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c apt (requalified) — adenine phosphoribosyltransferase apt adoK (family_assigned) — carbohydrate kinase family protein adoK Rv3645 (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv3645

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.