MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1086 · 44 genes shown · anchor idsA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1086 (family_assigned) — undecaprenyl diphosphate synthase family protein Rv1086 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsB (family_assigned) — polyprenyl synthetase family protein idsB Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c idi (requalified) — isopentenyl-diphosphate Delta-isomerase idi lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 Rv3382c (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase Rv3382c grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 cdsA (requalified) — phosphatidate cytidylyltransferase cdsA dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr proS (requalified) — proline--tRNA ligase proS nusA (requalified) — transcription termination factor NusA nusA grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 phyA (requalified) — presqualene diphosphate synthase HpnD phyA Rv2360c (family_assigned) — hypothetical protein Rv2360c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE rpsA (requalified) — 30S ribosomal protein S1 rpsA menJ (requalified) — menaquinone reductase menJ pgsA3 (requalified) — CDP-diacylglycerol--glycerol-3-phosphate 3-phospha pgsA3 pssA (requalified) — CDP-diacylglycerol--serine O-phosphatidyltransfera pssA pgsA1 (requalified) — CDP-diacylglycerol--inositol 3-phosphatidyltransfe pgsA1 Rv2182c (family_assigned) — lysophospholipid acyltransferase family protein Rv2182c Rv2252 (requalified) — diacylglycerol kinase Rv2252 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxs1 (requalified) — 1-deoxy-D-xylulose 5-phosphate synthase dxs1 dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 rip (requalified) — zinc metalloprotease Rip rip Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c ileS (requalified) — isoleucine--tRNA ligase ileS gltS (requalified) — glutamate--tRNA ligase gltS argS (requalified) — arginine--tRNA ligase argS metS (requalified) — methionine--tRNA ligase metS leuS (requalified) — leucine--tRNA ligase leuS lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX rimP (requalified) — ribosome maturation factor RimP rimP rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rplK (requalified) — 50S ribosomal protein L11 rplK rpsG (requalified) — 30S ribosomal protein S7 rpsG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.