MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1084 · 45 genes shown · anchor mca · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 mca (requalified) — mycothiol conjugate amidase Mca mca Rv1083 (dark) — hypothetical protein Rv1083 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0519c (family_assigned) — membrane protein Rv0519c Rv1987 (family_assigned) — cellulose-binding protein Rv1987 celA1 (requalified) — cellulase CelA celA1 celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b greA (requalified) — transcription elongation factor GreA greA eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 eccB4 (family_assigned) — type VII secretion system ESX-4 subunit EccB4 eccB4 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mshD (requalified) — mycothiol synthase mshD Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv0358 (requalified) — peptidase M50 Rv0358 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c lppL (family_assigned) — hypothetical protein lppL Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2732c (family_assigned) — hypothetical protein Rv2732c mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks13 (requalified) — polyketide synthase Pks13 pks13 Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH pirG (requalified) — exported repetitive protein pirG sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 celA2a (family_assigned) — Probable cellulase CelA2a (endo-1,4-beta-glucanase celA2a bglS (requalified) — beta-glucosidase BglS bglS Rv0061c (dark) — hypothetical protein Rv0061c spmT (requalified) — sphingomyelinase spmT Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv2159c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv2159c rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpsO (requalified) — 30S ribosomal protein S15 rpsO eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 eccD5 (family_assigned) — type VII secretion system ESX-5 subunit EccD5 eccD5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.