MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1072 · 46 genes shown · anchor echA9 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1072 (family_assigned) — Bax inhibitor-1/YccA family protein Rv1072 Rv1073 (family_assigned) — hypothetical protein Rv1073 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB echA9 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA9 echA8 (requalified) — enoyl-CoA hydratase echA8 Rv1069c (family_assigned) — alpha/beta-hydrolase family protein Rv1069c Rv1234 (requalified) — general stress protein Rv1234 ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 sodA (requalified) — superoxide dismutase sodA 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv2100 (family_assigned) — hypothetical protein Rv2100 Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv0393 (family_assigned) — hypothetical protein Rv0393 gltB (family_assigned) — glutamate synthase large subunit gltB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR mmsB (requalified) — 3-hydroxyisobutyrate dehydrogenase mmsB fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 Rv1863c (family_assigned) — integral membrane protein Rv1863c purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0807 (family_assigned) — sterol carrier family protein Rv0807 lpqY (family_assigned) — trehalose ABC transporter substrate-binding protei lpqY sugA (family_assigned) — trehalose ABC transporter permease SugA sugA sugC (family_assigned) — trehalose ABC transporter ATP-binding protein SugC sugC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c lpqZ (family_assigned) — glycine betaine ABC transporter substrate-binding lpqZ ilvN (family_assigned) — acetolactate synthase small subunit ilvN ilvC (requalified) — ketol-acid reductoisomerase ilvC leuB (requalified) — 3-isopropylmalate dehydrogenase leuB ilvA (requalified) — threonine ammonia-lyase ilvA ilvB1 (family_assigned) — acetolactate synthase large subunit IlvB ilvB1 ilvG (requalified) — acetolactate synthase ilvG rplQ (requalified) — 50S ribosomal protein L17 rplQ rplO (requalified) — 50S ribosomal protein L15 rplO rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplM (requalified) — 50S ribosomal protein L13 rplM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.