MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1067c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS19 (family_assigned) — PE-PGRS family protein PE_PGRS19 PE_PGRS19 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 pknD (requalified) — serine/threonine protein kinase PknD pknD mmpL9 (requalified) — RND transporter MmpL9 mmpL9 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1507c (family_assigned) — WbqC family protein Rv1507c lppD (requalified) — lipoprotein LppD lppD cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA PPE58 (family_assigned) — PPE family protein PPE58 PPE58 Rv3424c (dark) — hypothetical protein Rv3424c PE_PGRS49 (family_assigned) — PE-PGRS family protein PE_PGRS49 PE_PGRS49 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 Rv0311 (family_assigned) — hypothetical protein Rv0311 omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP pstS2 (family_assigned) — phosphate ABC transporter substrate-binding lipopr pstS2 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB qcrC (requalified) — cytochrome c qcrC Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 garA (requalified) — glycogen accumulation regulator GarA garA Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv0128 (family_assigned) — YoaK family protein Rv0128 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 ift (requalified) — necrotizing toxin immunity factor IFT ift esxE (requalified) — ESAT-6 like protein EsxE esxE eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxF (requalified) — pore-forming CpnT exporter EsxF esxF Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE atpB (family_assigned) — F0F1 ATP synthase subunit A atpB lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ cobB (requalified) — NAD-dependent protein deacylase cobB cinA (requalified) — competence/damage-inducible protein A cinA Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.