MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1049 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1049 (requalified) — oxidation-sensing regulator MosR Rv1049 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1050 (family_assigned) — SDR family oxidoreductase Rv1050 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv1048c (dark) — hypothetical protein Rv1048c sigI (requalified) — RNA polymerase sigma factor SigI sigI sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv0767c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0767c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c Rv2034 (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv2034 ephB (requalified) — epoxide hydrolase EphB ephB Rv3055 (family_assigned) — helix-turn-helix domain-containing protein Rv3055 Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 cobB (requalified) — NAD-dependent protein deacylase cobB embR (requalified) — response regulator transcription factor EmbR embR Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c Rv2913c (family_assigned) — amidohydrolase family protein Rv2913c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 virS (family_assigned) — AraC family transcriptional regulator virS Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3502c (requalified) — 3-oxoacyl-ACP reductase Rv3502c Rv1771 (requalified) — L-gulono-1%2C4-lactone dehydrogenase Rv1771 Rv3174 (family_assigned) — SDR family oxidoreductase Rv3174 tpx (requalified) — thiol peroxidase tpx Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 mrr (requalified) — restriction endonuclease mrr Rv0326 (family_assigned) — hypothetical protein Rv0326 cyp135A1 (requalified) — cytochrome P450 cyp135A1 Rv0213c (requalified) — methyltransferase Rv0213c Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0762c (family_assigned) — nuclear transport factor 2 family protein Rv0762c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.