MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1037c · 27 genes shown · anchor esxJ · open gene page → · ← back to 1 hop

Evidence: Min score 0
esxI (requalified) — type VII secretion system ESX-5 protein EsxL esxI esxW (requalified) — type VII secretion system protein EsxW esxW esxJ (requalified) — type VII secretion system ESX-5 protein EsxJ esxJ esxV (requalified) — ESAT-6 like protein EsxV esxV esxO (requalified) — type VII secretion system effector EsxO esxO esxP (requalified) — type VII secretion system ESX-5 protein EsxJ esxP esxN (requalified) — ESAT-6 like protein EsxN esxN esxL (requalified) — type VII secretion system ESX-5 protein EsxL esxL cspA (requalified) — cold shock protein CspA cspA esxK (requalified) — type VII secretion system ESX-5 protein EsxJ esxK esxA (requalified) — ESAT-6 protein EsxA esxA rplA (requalified) — 50S ribosomal protein L1 rplA PPE18 (family_assigned) — PPE family protein PPE18 PPE18 rpsL (requalified) — 30S ribosomal protein S12 rpsL rplO (requalified) — 50S ribosomal protein L15 rplO tuf (requalified) — elongation factor Tu tuf rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpmE (requalified) — 50S ribosomal protein L31 rpmE esxB (family_assigned) — type VII secretion system ESX-1 WXG100 family targ esxB eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 rplK (requalified) — 50S ribosomal protein L11 rplK rplP (requalified) — 50S ribosomal protein L16 rplP rplJ (requalified) — 50S ribosomal protein L10 rplJ rplV (requalified) — 50S ribosomal protein L22 rplV rpmC (requalified) — 50S ribosomal protein L29 rpmC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.