MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1033c · 37 genes shown · anchor trcS · open gene page → · ← back to 1 hop

Evidence: Min score 0
trcR (requalified) — two-component system response regulator TrcR trcR trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS kdpE (requalified) — two-component system response regulator KdpE kdpE tcrY (requalified) — two component sensor kinase TcrY tcrY Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB mprB (requalified) — two-component system sensor histidine kinase MprB mprB senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 phoR (requalified) — sensory box histidine kinase PhoR phoR Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c moxR3 (family_assigned) — MoxR family ATPase moxR3 mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB tcrX (requalified) — two-component system response regulator TcrX tcrX prrA (requalified) — two-component system response regulator PrrA prrA regX3 (requalified) — two component sensory transduction protein RegX regX3 phoP (requalified) — two-component system response regulator PhoP phoP kdpD (requalified) — sensor histidine kinase KdpD kdpD kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA mtrA (requalified) — two-component system response regulator MtrA mtrA tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mprA (requalified) — two-component system response regulator MprA mprA pepD (requalified) — serine protease PepD pepD Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr embR (requalified) — response regulator transcription factor EmbR embR Rv1931c (family_assigned) — transcriptional regulator Rv1931c sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3163c (dark) — DUF58 domain-containing protein Rv3163c Rv3165c (dark) — hypothetical protein Rv3165c Rv3166c (family_assigned) — DUF4129 domain-containing protein Rv3166c Rv3162c (family_assigned) — integral membrane protein Rv3162c lpqB (requalified) — MtrAB system accessory lipoprotein LpqB lpqB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.