MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1032c · 34 genes shown · anchor trcR · open gene page → · ← back to 1 hop

Evidence: Min score 0
trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS trcR (requalified) — two-component system response regulator TrcR trcR kdpE (requalified) — two-component system response regulator KdpE kdpE tcrX (requalified) — two-component system response regulator TcrX tcrX prrA (requalified) — two-component system response regulator PrrA prrA regX3 (requalified) — two component sensory transduction protein RegX regX3 phoP (requalified) — two-component system response regulator PhoP phoP mtrA (requalified) — two-component system response regulator MtrA mtrA tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA mprA (requalified) — two-component system response regulator MprA mprA Rv2884 (family_assigned) — transcriptional regulator Rv2884 Rv0818 (requalified) — response regulator transcription factor Rv0818 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c tcrY (requalified) — two component sensor kinase TcrY tcrY Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c prrB (requalified) — two-component system sensor histidine kinase PrrB prrB mprB (requalified) — two-component system sensor histidine kinase MprB mprB kdpD (requalified) — sensor histidine kinase KdpD kdpD Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA phoR (requalified) — sensory box histidine kinase PhoR phoR senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 mtrB (requalified) — two-component system sensor histidine kinase MtrB mtrB Rv0601c (requalified) — two component sensor kinase HK2 Rv0601c Rv0603 (family_assigned) — hypothetical protein Rv0603 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr mshD (requalified) — mycothiol synthase mshD phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC Rv0794c (requalified) — oxidoreductase Rv0794c garA (requalified) — glycogen accumulation regulator GarA garA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA mtr (requalified) — mycothione reductase mtr lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.