MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1028A · 46 genes shown · anchor kdpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
kdpF (requalified) — membrane protein KdpF kdpF kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA kdpB (family_assigned) — potassium-transporting ATPase subunit KdpB kdpB kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC kdpE (requalified) — two-component system response regulator KdpE kdpE kdpD (requalified) — sensor histidine kinase KdpD kdpD lprJ (requalified) — lipoprotein LprJ lprJ cya (requalified) — adenylate cyclase cya Rv2212 (requalified) — adenylyl cyclase Rv2212 lprF (requalified) — lipoprotein LprF lprF arfB (family_assigned) — hypothetical protein arfB Rv1647 (requalified) — adenylate cyclase Rv1647 Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c trcR (requalified) — two-component system response regulator TrcR trcR Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv1691 (family_assigned) — hypothetical protein Rv1691 Rv1692 (family_assigned) — HAD-IIA family hydrolase Rv1692 Rv1693 (dark) — hypothetical protein Rv1693 ppnK (requalified) — NAD kinase ppnK tlyA (requalified) — 16S/23S rRNA (cytidine-2'-O)-methyltransferase Tly tlyA spmT (requalified) — sphingomyelinase spmT relA (family_assigned) — RelA/SpoT family protein relA pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA Rv1624c (family_assigned) — HdeD family acid-resistance protein Rv1624c ribA2 (requalified) — bifunctional 3%2C4-dihydroxy-2-butanone-4-phosphat ribA2 pepB (requalified) — leucyl aminopeptidase pepB gcvT (requalified) — aminomethyltransferase gcvT ilvE (requalified) — branched-chain amino acid aminotransferase ilvE Rv3645 (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv3645 Rv1320c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1320c Rv1371 (family_assigned) — cytochrome b5 domain-containing protein Rv1371 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 Rv2695 (requalified) — alpha/beta fold hydrolase Rv2695 papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 Rv1546 (family_assigned) — SRPBCC family protein Rv1546 Rv3415c (family_assigned) — hypothetical protein Rv3415c arfC (family_assigned) — hypothetical protein arfC arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA Rv0898c (family_assigned) — DUF2630 family protein Rv0898c Rv0897c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0897c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.