MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1025 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 eno (requalified) — phosphopyruvate hydratase eno lpqU (requalified) — lytic murein transglycosylase lpqU Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 mfd (requalified) — transcription-repair coupling factor mfd Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 Rv1321 (requalified) — endonuclease NucS Rv1321 Rv0496 (family_assigned) — hypothetical protein Rv0496 relA (family_assigned) — RelA/SpoT family protein relA ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 ftsQ (requalified) — cell division protein FtsQ ftsQ pykA (requalified) — pyruvate kinase pykA pgk (requalified) — phosphoglycerate kinase pgk gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap fba (requalified) — class II fructose-bisphosphate aldolase fba hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rdgB (family_assigned) — RdgB/HAM1 family non-canonical purine NTP pyrophos rdgB guaB2 (requalified) — IMP dehydrogenase guaB2 guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 guaB3 (family_assigned) — GuaB3 family IMP dehydrogenase-related protein guaB3 sigA (requalified) — RNA polymerase sigma factor sigA sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv2901c (dark) — DUF2469 domain-containing protein Rv2901c secG (family_assigned) — preprotein translocase subunit SecG secG clpS (requalified) — ATP-dependent Clp protease adapter ClpS clpS rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c helZ (requalified) — DEAD/DEAH box helicase helZ Rv3194c (family_assigned) — PDZ domain-containing protein Rv3194c Rv3196 (family_assigned) — hypothetical protein Rv3196 clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.