MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1024 · 46 genes shown · anchor eno · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1024 (family_assigned) — septum formation initiator family protein Rv1024 ftsQ (requalified) — cell division protein FtsQ ftsQ eno (requalified) — phosphopyruvate hydratase eno Rv1025 (dark) — hypothetical protein Rv1025 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 mfd (requalified) — transcription-repair coupling factor mfd lpqU (requalified) — lytic murein transglycosylase lpqU Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv3909 (dark) — hypothetical protein Rv3909 Rv3835 (family_assigned) — septum formation family protein Rv3835 Rv3658c (family_assigned) — type II secretion system F family protein Rv3658c ptrp (family_assigned) — hypothetical protein ptrp Rv2843 (family_assigned) — hypothetical protein Rv2843 murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsW (family_assigned) — putative lipid II flippase FtsW ftsW murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF pykA (requalified) — pyruvate kinase pykA pgk (requalified) — phosphoglycerate kinase pgk gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 pgi (requalified) — glucose-6-phosphate isomerase pgi gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap fba (requalified) — class II fructose-bisphosphate aldolase fba Rv1021 (requalified) — nucleoside triphosphate pyrophosphohydrolase Rv1021 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv0496 (family_assigned) — hypothetical protein Rv0496 relA (family_assigned) — RelA/SpoT family protein relA ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB uvrA (family_assigned) — excinuclease ABC subunit UvrA uvrA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB Rv2164c (family_assigned) — hypothetical protein Rv2164c murJ (requalified) — murein biosynthesis integral membrane protein MurJ murJ mutT4 (requalified) — NUDIX hydrolase mutT4 sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv3906c (requalified) — pullulanase Rv3906c Rv3836 (family_assigned) — metallopeptidase family protein Rv3836 serS (requalified) — serine--tRNA ligase serS Rv3659c (requalified) — conjugal transfer protein Rv3659c Rv3657c (family_assigned) — membrane protein Rv3657c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.