MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1009 · 46 genes shown · anchor ksgA · open gene page → · ← back to 1 hop

Evidence: Min score 0
rpfB (requalified) — resuscitation-promoting factor RpfB rpfB ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA tatD (requalified) — deoxyribonuclease TatD tatD fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE metS (requalified) — methionine--tRNA ligase metS Rv3268 (family_assigned) — hypothetical protein Rv3268 Rv1012 (dark) — hypothetical protein Rv1012 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0012 (family_assigned) — membrane protein Rv0012 Rv3915 (requalified) — peptidoglycan hydrolase Rv3915 rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ lepA (requalified) — translation elongation factor 4 lepA Rv2478c (family_assigned) — hypothetical protein Rv2478c Rv1885c (requalified) — chorismate mutase Rv1885c fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c ispF (requalified) — 2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate syn ispF ispD (requalified) — 2-C-methyl-D-erythritol 4-phosphate cytidylyltrans ispD dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE lytB2 (requalified) — 4-hydroxy-3-methylbut-2-enyl diphosphate reductase lytB2 gltS (requalified) — glutamate--tRNA ligase gltS leuS (requalified) — leucine--tRNA ligase leuS argS (requalified) — arginine--tRNA ligase argS ileS (requalified) — isoleucine--tRNA ligase ileS metH (requalified) — methionine synthase metH lcp1 (requalified) — phosphotransferase Lcp1 lcp1 Rv1312 (family_assigned) — DUF2550 domain-containing protein Rv1312 rplF (requalified) — 50S ribosomal protein L6 rplF pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 mas (requalified) — mycocerosate synthase mas pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks16 (requalified) — fatty acyl-AMP ligase pks16 Rv1824 (family_assigned) — small basic family protein Rv1824 pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv1825 (family_assigned) — DUF881 domain-containing protein Rv1825 gcvH (requalified) — glycine cleavage system protein GcvH gcvH

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.