MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1007c · 41 genes shown · anchor tatD · open gene page → · ← back to 1 hop

Evidence: Min score 0
metS (requalified) — methionine--tRNA ligase metS gltS (requalified) — glutamate--tRNA ligase gltS leuS (requalified) — leucine--tRNA ligase leuS tatD (requalified) — deoxyribonuclease TatD tatD argS (requalified) — arginine--tRNA ligase argS ileS (requalified) — isoleucine--tRNA ligase ileS metH (requalified) — methionine synthase metH proS (requalified) — proline--tRNA ligase proS metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE fmt (requalified) — methionyl-tRNA formyltransferase fmt lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX lysS (requalified) — lysine--tRNA ligase lysS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT rplW (requalified) — 50S ribosomal protein L23 rplW rplR (requalified) — 50S ribosomal protein L18 rplR rplF (requalified) — 50S ribosomal protein L6 rplF rplV (requalified) — 50S ribosomal protein L22 rplV rplM (requalified) — 50S ribosomal protein L13 rplM rplJ (requalified) — 50S ribosomal protein L10 rplJ Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA rpfB (requalified) — resuscitation-promoting factor RpfB rpfB lepA (requalified) — translation elongation factor 4 lepA ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE Rv2478c (family_assigned) — hypothetical protein Rv2478c guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c metB (requalified) — cystathionine gamma-synthase metB metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC sahH (requalified) — adenosylhomocysteinase sahH metK (requalified) — S-adenosylmethionine synthetase metK fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD dfrA (requalified) — dihydrofolate reductase dfrA gcvT (requalified) — aminomethyltransferase gcvT purN (requalified) — phosphoribosylglycinamide formyltransferase purN pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS rpsB (requalified) — 30S ribosomal protein S2 rpsB rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rplO (requalified) — 50S ribosomal protein L15 rplO

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.