MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1003 · 46 genes shown · anchor pmt · open gene page → · ← back to 1 hop

Evidence: Min score 0
rsmI (requalified) — 16S rRNA (cytidine(1402)-2'-O)-methyltransferase rsmI Rv1002c (requalified) — dolichyl-phosphate-mannose--protein mannosyltransf Rv1002c Rv3752c (requalified) — nucleoside deaminase Rv3752c alr (requalified) — alanine racemase alr Rv2689c (requalified) — class I SAM-dependent RNA methyltransferase Rv2689c murG (requalified) — undecaprenyldiphospho-muramoylpentapeptide beta-N- murG ftsZ (requalified) — cell division protein FtsZ ftsZ era (requalified) — GTPase Era era dgt (requalified) — deoxyguanosinetriphosphate triphosphohydrolase dgt rnhB (requalified) — ribonuclease HII rnhB rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2146c (family_assigned) — YggT family protein Rv2146c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv3753c (family_assigned) — hypothetical protein Rv3753c Rv2296 (requalified) — haloalkane dehalogenase Rv2296 tyrA (requalified) — prephenate dehydrogenase TyrA tyrA xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv2205c (requalified) — glycerate kinase Rv2205c tsaE (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaE ddlA (requalified) — D-alanine--D-alanine ligase DdlA ddlA ald (requalified) — alanine dehydrogenase ald murF (requalified) — UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanin murF tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB gcp (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera gcp Rv2690c (family_assigned) — integral membrane protein Rv2690c ceoB (requalified) — TRK system potassium uptake protein CeoB ceoB ceoC (requalified) — TRK system potassium uptake protein CeoC ceoC trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c murD (requalified) — UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase murD murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX murC (requalified) — UDP-N-acetylmuramate--L-alanine ligase murC ftsW (family_assigned) — putative lipid II flippase FtsW ftsW ftsQ (requalified) — cell division protein FtsQ ftsQ Rv2147c (requalified) — cell division protein SepF Rv2147c Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c yfiH (family_assigned) — laccase domain-containing protein yfiH Rv2365c (requalified) — cytidine deaminase Rv2365c Rv2367c (requalified) — endoribonuclease Rv2367c Rv2366c (family_assigned) — hemolysin family protein Rv2366c rpsF (requalified) — 30S ribosomal protein S6 rpsF

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.