MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1001 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
arcA (requalified) — arginine deiminase arcA argF (requalified) — ornithine carbamoyltransferase argF argH (requalified) — argininosuccinate lyase argH argG (requalified) — argininosuccinate synthase argG Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv1000c (family_assigned) — hypothetical protein Rv1000c Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 pta (requalified) — phosphate acetyltransferase pta Rv1155 (requalified) — PPOX class F420-dependent oxidoreductase Rv1155 Rv2074 (requalified) — F420-dependent biliverdin reductase Rv2074 Rv3369 (family_assigned) — hypothetical protein Rv3369 Rv2991 (requalified) — PPOX class F420-dependent oxidoreductase Rv2991 Rv1903 (family_assigned) — phage holin family protein Rv1903 argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argB (requalified) — acetylglutamate kinase argB argD (requalified) — acetylornithine transaminase argD argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC argR (requalified) — arginine repressor argR vapB39 (requalified) — antitoxin VapB39 vapB39 Rv1722 (requalified) — biotin carboxylase Rv1722 vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 Rv0976c (family_assigned) — acyclic terpene utilization AtuA family protein Rv0976c Rv1378c (family_assigned) — hypothetical protein Rv1378c alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA Rv3074 (family_assigned) — DUF222 domain-containing protein Rv3074 dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT lipB (requalified) — lipoyl(octanoyl) transferase LipB lipB lipA (requalified) — lipoyl synthase lipA Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 ephD (family_assigned) — SDR family oxidoreductase ephD ackA (requalified) — acetate kinase ackA glcB (requalified) — malate synthase G glcB Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC acs (requalified) — acetate--CoA ligase acs Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv1154c (family_assigned) — hypothetical protein Rv1154c Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 omt (requalified) — class I SAM-dependent methyltransferase omt Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 Rv2073c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv2073c cobK (requalified) — cobalt-precorrin-6A reductase cobK cobM (requalified) — precorrin-4 C(11)-methyltransferase cobM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.