MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1000c · 46 genes shown · anchor arcA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1000c (family_assigned) — hypothetical protein Rv1000c Rv2573 (requalified) — 2-dehydropantoate 2-reductase Rv2573 arcA (requalified) — arginine deiminase arcA Rv0976c (family_assigned) — acyclic terpene utilization AtuA family protein Rv0976c Rv1378c (family_assigned) — hypothetical protein Rv1378c alkA (family_assigned) — bifunctional regulatory protein/DNA repair enzyme alkA Rv3074 (family_assigned) — DUF222 domain-containing protein Rv3074 Rv1148c (family_assigned) — hypothetical protein Rv1148c Rv1128c (family_assigned) — hypothetical protein Rv1128c Rv1945 (requalified) — HNH endonuclease signature motif containing protei Rv1945 ruvA (requalified) — Holliday junction branch migration protein RuvA ruvA ruvC (requalified) — crossover junction endodeoxyribonuclease RuvC ruvC Rv3395c (family_assigned) — hypothetical protein Rv3395c panC (requalified) — pantoate--beta-alanine ligase panC panB (requalified) — 3-methyl-2-oxobutanoate hydroxymethyltransferase panB Rv2575 (requalified) — neutral zinc metallopeptidase Rv2575 aspS (requalified) — aspartate--tRNA ligase aspS Rv2574 (family_assigned) — SRPBCC family protein Rv2574 argF (requalified) — ornithine carbamoyltransferase argF argH (requalified) — argininosuccinate lyase argH argG (requalified) — argininosuccinate synthase argG Rv2531c (requalified) — amino acid decarboxylase Rv2531c Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 accD2 (family_assigned) — acyl-CoA carboxylase subunit beta accD2 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 accA2 (family_assigned) — biotin carboxylase N-terminal domain-containing pr accA2 fadE12 (requalified) — acyl-CoA dehydrogenase fadE12 echA7 (family_assigned) — enoyl-CoA hydratase family protein echA7 Rv0036c (family_assigned) — TIGR03084 family metal-binding protein Rv0036c Rv1377c (requalified) — class I SAM-dependent methyltransferase Rv1377c Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv2633c (requalified) — non-heme di-iron catalase Rv2633c pyrR (family_assigned) — bifunctional pyr operon transcriptional regulator/ pyrR ogt (requalified) — methylated-DNA--protein-cysteine methyltransferase ogt Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv1321 (requalified) — endonuclease NucS Rv1321 Rv1322 (family_assigned) — hypothetical protein Rv1322 Rv3394c (family_assigned) — DNA polymerase Y family protein Rv3394c Rv2100 (family_assigned) — hypothetical protein Rv2100 Rv1702c (requalified) — HNH endonuclease signature motif containing protei Rv1702c Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv0393 (family_assigned) — hypothetical protein Rv0393 Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.