MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0950c · 46 genes shown · anchor sucC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0950c (family_assigned) — M23 family metallopeptidase Rv0950c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB Rv1885c (requalified) — chorismate mutase Rv1885c ripC (requalified) — peptidoglycan hydrolase RipC ripC sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC ponA2 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA2 rip (requalified) — zinc metalloprotease Rip rip ftsX (requalified) — permease-like cell division protein FtsX ftsX sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD lepB (requalified) — signal peptidase I lepB secF (family_assigned) — protein translocase subunit SecF secF rpfB (requalified) — resuscitation-promoting factor RpfB rpfB ponA1 (requalified) — bifunctional penicillin-insensitive transglycosyla ponA1 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA lipY (requalified) — triacylglycerol lipase Lip lipY Rv2252 (requalified) — diacylglycerol kinase Rv2252 aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv0948c (requalified) — chorismate mutase Rv0948c Rv2189c (dark) — hypothetical protein Rv2189c ksgA (requalified) — 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-d ksgA Rv0175 (family_assigned) — hypothetical protein Rv0175 pimB (requalified) — GDP-mannose-dependent alpha-(1-6)-phosphatidylinos pimB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c sdhC (family_assigned) — succinate dehydrogenase%2C cytochrome b556 subunit sdhC sdhB (family_assigned) — succinate dehydrogenase iron-sulfur subunit sdhB dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT sdhD (family_assigned) — succinate dehydrogenase hydrophobic membrane ancho sdhD sepIVA (requalified) — cell division protein SepIVA sepIVA wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv1209 (family_assigned) — DivIVA domain-containing protein Rv1209 rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pbpB (requalified) — D%2CD-transpeptidase PbpB pbpB dxr (requalified) — 1-deoxy-D-xylulose-5-phosphate reductoisomerase dxr gcpE (requalified) — flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-e gcpE Rv2867c (family_assigned) — GNAT family N-acetyltransferase Rv2867c cdsA (requalified) — phosphatidate cytidylyltransferase cdsA mpt83 (requalified) — cell surface glycolipoprotein Mpt83 mpt83 Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c ftsE (family_assigned) — cell division ATP-binding protein FtsE ftsE smpB (family_assigned) — SsrA-binding protein SmpB smpB Rv3099c (family_assigned) — maleylpyruvate isomerase family mycothiol-dependen Rv3099c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.