MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0948c · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0948c (requalified) — chorismate mutase Rv0948c aroG (requalified) — 3-deoxy-7-phosphoheptulonate synthase class II aroG aroF (requalified) — chorismate synthase aroF tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv1885c (requalified) — chorismate mutase Rv1885c entC (requalified) — isochorismate synthase entC trpG (requalified) — anthranilate synthase component II trpG mbtI (requalified) — salicylate synthase mbtI Rv1005c (requalified) — para-aminobenzoate synthase component I Rv1005c Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c Rv2179c (requalified) — polyadenylate-specific 3'-exoribonuclease AS Rv2179c aroB (requalified) — 3-dehydroquinate synthase aroB Rv2180c (family_assigned) — integral membrane protein Rv2180c Rv2181 (requalified) — alpha-(1-2)-phosphatidylinositol mannoside mannosy Rv2181 aroA (requalified) — 3-phosphoshikimate 1-carboxyvinyltransferase aroA aroK (requalified) — shikimate kinase AroK aroK Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c hisC2 (requalified) — histidinol-phosphate transaminase hisC2 hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 cobC (requalified) — aminotransferase cobC trpD (requalified) — anthranilate phosphoribosyltransferase trpD trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB mbtB (requalified) — phenyloxazoline synthase MbtB mbtB menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD mbtA (requalified) — bifunctional salicyl-AMP ligase/salicyl-S-ArCP syn mbtA Rv0812 (requalified) — 4-amino-4-deoxychorismate lyase Rv0812 fadD22 (requalified) — p-hydroxybenzoic acid--AMP ligase FadD22 fadD22 fadD29 (requalified) — long-chain-fatty-acid--AMP ligase FadD29 fadD29 pks15 (requalified) — polyketide synthase pks15 35kd_ag (family_assigned) — hypothetical protein 35kd_ag Rv2468c (requalified) — hypothetical protein Rv2468c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.