MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0944 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 fpg (requalified) — DNA-formamidopyrimidine glycosylase fpg Rv0945 (requalified) — oxidoreductase Rv0945 polA (requalified) — DNA polymerase I polA nei (requalified) — endonuclease VIII Nei2 nei Rv0943c (dark) — hypothetical protein Rv0943c Rv1903 (family_assigned) — phage holin family protein Rv1903 Rv2090 (requalified) — 5'-3' exonuclease Rv2090 coaE (requalified) — dephospho-CoA kinase coaE Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 nth (requalified) — endonuclease III nth Rv1870c (family_assigned) — hypothetical protein Rv1870c Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c acyP (requalified) — acylphosphatase acyP Rv2923c (family_assigned) — OsmC family protein Rv2923c smc (requalified) — chromosome segregation protein SMC smc Rv2926c (family_assigned) — hypothetical protein Rv2926c Rv3485c (requalified) — short-chain type dehydrogenase/reductase Rv3485c Rv3530c (family_assigned) — SDR family oxidoreductase Rv3530c Rv0769 (family_assigned) — SDR family oxidoreductase Rv0769 Rv1714 (family_assigned) — SDR family oxidoreductase Rv1714 dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK recA (requalified) — intein-containing recombinase RecA recA Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 lhr (requalified) — ATP-dependent helicase lhr Rv3555c (family_assigned) — DUF559 domain-containing protein Rv3555c Rv3295 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3295 Rv2191 (family_assigned) — hypothetical protein Rv2191 Rv3083 (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3083 Rv0565c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0565c Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 ethA (requalified) — FAD-containing monooxygenase EthA ethA nanT (family_assigned) — sialate:H+ symport family MFS transporter nanT Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 arcA (requalified) — arginine deiminase arcA fadB5 (family_assigned) — medium chain dehydrogenase/reductase family protei fadB5 ligC (requalified) — ATP-dependent DNA ligase ligC kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB acpS (requalified) — holo-ACP synthase acpS rpsA (requalified) — 30S ribosomal protein S1 rpsA rnhB (requalified) — ribonuclease HII rnhB xthA (requalified) — exodeoxyribonuclease III protein XthA xthA Rv2828A (dark) — hypothetical protein Rv2828A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.