MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0921 · 45 genes shown · anchor tnpB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0921 (family_assigned) — IS607-like element IS1535 family transposase Rv0921 tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv3827c (requalified) — transposase Rv3827c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv2885c (requalified) — transposase Rv2885c tnpB (family_assigned) — IS607 family element RNA-guided endonuclease TnpB tnpB Rv0920c (family_assigned) — IS256-like element IS1554 family transposase Rv0920c Rv0071 (family_assigned) — reverse transcriptase domain-containing protein Rv0071 Rv3334 (family_assigned) — hypoxia response transcriptional regulator Rv3334 cyp123 (requalified) — cytochrome P450 cyp123 Rv0401 (dark) — DUF3054 domain-containing protein Rv0401 Rv2956 (requalified) — [alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyrano Rv2956 Rv2792c (family_assigned) — IS607-like element IS1537 family transposase Rv2792c Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 Rv3828c (requalified) — resolvase Rv3828c Rv2979c (family_assigned) — IS607 family transposase Rv2979c Rv2886c (requalified) — resolvase Rv2886c fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 ltp1 (requalified) — lipid-transfer protein ltp1 thiL (requalified) — thiamine-phosphate kinase thiL cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 Rv3428c (requalified) — transposase Rv3428c Rv2424c (requalified) — transposase Rv2424c Rv2177c (requalified) — transposase Rv2177c istB (family_assigned) — IS21-like element ISMt2 family helper ATPase IstB istB Rv2944 (requalified) — insertion sequence element IS1533 transposase Rv2944 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c aldA (requalified) — aldehyde dehydrogenase aldA Rv0762c (family_assigned) — nuclear transport factor 2 family protein Rv0762c pks13 (requalified) — polyketide synthase Pks13 pks13 Rv0763c (requalified) — ferredoxin Rv0763c fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 lpqK (family_assigned) — serine hydrolase domain-containing protein lpqK Rv0398c (family_assigned) — hypothetical protein Rv0398c Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 Rv0360c (family_assigned) — hypothetical protein Rv0360c qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB Rv2957 (requalified) — PGL/p-HBAD biosynthesis glycosyltransferase Rv2957

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.