MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0918 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapC24 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC24 Rv2775 (requalified) — GCN5-like N-acetyltransferase Rv2775 wbbL2 (family_assigned) — glycosyltransferase family 2 protein wbbL2 Rv0133 (family_assigned) — GNAT family N-acetyltransferase Rv0133 Rv2170 (requalified) — N-acetyltransferase Rv2170 Rv2669 (requalified) — N-acetyltransferase Rv2669 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 rimI (requalified) — ribosomal protein S18-alanine N-acetyltransferase rimI Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mshD (requalified) — mycothiol synthase mshD PPE5 (family_assigned) — PPE family protein PPE5 PPE5 Rv2803 (family_assigned) — hypothetical protein Rv2803 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapB24 (requalified) — antitoxin vapB24 Rv2949c (family_assigned) — chorismate pyruvate-lyase family protein Rv2949c PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2209 (requalified) — MFS transporter Rv2209 Rv1004c (family_assigned) — hypothetical protein Rv1004c Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c PPE34 (family_assigned) — PPE family protein PPE34 PPE34 Rv1524 (requalified) — glycosyltransferase Rv1524 fgd2 (requalified) — F420-dependent hydroxymycolic acid dehydrogenase fgd2 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 ephF (family_assigned) — alpha/beta hydrolase ephF amt (requalified) — ammonium transporter amt Rv2169c (dark) — DUF3040 domain-containing protein Rv2169c lppM (requalified) — lipoprotein LppM lppM Rv3231c (family_assigned) — hypothetical protein Rv3231c Rv3311 (family_assigned) — primosomal protein Rv3311 Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2668 (family_assigned) — hypothetical protein Rv2668 trmD (requalified) — tRNA (guanosine(37)-N1)-methyltransferase TrmD trmD clpC2 (family_assigned) — ATP-dependent protease ATP-binding subunit ClpC clpC2 PPE6 (family_assigned) — PPE family protein PPE6 PPE6 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 tsaB (family_assigned) — tRNA (adenosine(37)-N6)-threonylcarbamoyltransfera tsaB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.