MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0913c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c gmk (requalified) — guanylate kinase gmk nuoC (family_assigned) — NADH-quinone oxidoreductase subunit C nuoC bacA (family_assigned) — vitamin B12 ABC transporter ATP-binding protein Ba bacA groES (requalified) — chaperonin GroES groES Rv1362c (family_assigned) — hypothetical protein Rv1362c Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 PPE14 (family_assigned) — PPE family protein PPE14 PPE14 pepB (requalified) — leucyl aminopeptidase pepB Rv1770 (family_assigned) — hypothetical protein Rv1770 lpqL (family_assigned) — M28 family metallopeptidase lpqL PE7 (family_assigned) — PE family protein PE7 PE7 fadB (requalified) — fatty oxidation protein FadB fadB fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 acs (requalified) — acetate--CoA ligase acs ltp3 (family_assigned) — thiolase domain-containing protein ltp3 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA apt (requalified) — adenine phosphoribosyltransferase apt pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoA (family_assigned) — NADH-quinone oxidoreductase subunit A nuoA nuoM (family_assigned) — NADH-quinone oxidoreductase subunit M nuoM nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB ilvG (requalified) — acetolactate synthase ilvG Rv0435c (family_assigned) — AAA family ATPase Rv0435c pgsA2 (family_assigned) — CDP-alcohol phosphatidyltransferase family protein pgsA2 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 Rv3090 (family_assigned) — SPFH domain-containing protein Rv3090 groEL1 (requalified) — chaperonin GroEL groEL1 groEL2 (requalified) — chaperonin GroEL groEL2 grpE (requalified) — nucleotide exchange factor GrpE grpE dnaK (requalified) — molecular chaperone DnaK dnaK htpG (requalified) — molecular chaperone HtpG htpG clpP2 (family_assigned) — ATP-dependent CLP protease proteolytic subunit Clp clpP2 Rv1363c (dark) — hypothetical protein Rv1363c mce2F (family_assigned) — MlaD family protein mce2F mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1A (family_assigned) — Mce family protein Mce1A mce1A mce1F (family_assigned) — MCE family protein mce1F

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.