MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0897c · 34 genes shown · anchor arfA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0897c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0897c Rv0898c (family_assigned) — DUF2630 family protein Rv0898c arfA (family_assigned) — peptidoglycan-binding protein ArfA arfA phyA (requalified) — presqualene diphosphate synthase HpnD phyA arfC (family_assigned) — hypothetical protein arfC Rv2850c (family_assigned) — magnesium chelatase subunit D family protein Rv2850c arfB (family_assigned) — hypothetical protein arfB Rv0958 (family_assigned) — ATP-binding protein Rv0958 cobN (family_assigned) — cobaltochelatase subunit CobN cobN Rv1265 (family_assigned) — hypothetical protein Rv1265 rsfB (family_assigned) — STAS domain-containing protein rsfB rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv1157c (dark) — hypothetical protein Rv1157c idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 Rv3399 (requalified) — S-adenosylmethionine-dependent methyltransferase Rv3399 grcC1 (requalified) — polyprenyl-diphosphate synthase GrcC grcC1 grcC2 (requalified) — polyprenyl-diphosphate synthase GrcC grcC2 idsB (family_assigned) — polyprenyl synthetase family protein idsB espK (family_assigned) — ESX-1 secretion-associated protein EspK espK PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 hemY (requalified) — protoporphyrinogen oxidase hemY cobO (requalified) — cob(I)alamin adenosyltransferase cobO hemZ (requalified) — ferrochelatase hemZ cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB kdpE (requalified) — two-component system response regulator KdpE kdpE kdpC (family_assigned) — K(+)-transporting ATPase subunit C kdpC Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 purN (requalified) — phosphoribosylglycinamide formyltransferase purN purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ cobL (requalified) — bifunctional cobalt-precorrin-7 (C(5))-methyltrans cobL Rv1314c (requalified) — cob(I)yrinic acid a%2Cc-diamide adenosyltransferas Rv1314c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.