MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0888 · 46 genes shown · anchor celA2b · open gene page → · ← back to 1 hop

Evidence: Min score 0
spmT (requalified) — sphingomyelinase spmT ctpD (requalified) — cobalt-translocating P-type ATPase CtpD ctpD Rv0312 (family_assigned) — Hsp70 family protein Rv0312 egtE (requalified) — ergothioneine biosynthesis PLP-dependent enzyme Eg egtE Rv3778c (family_assigned) — cysteine desulfurase-like protein Rv3778c csd (requalified) — cysteine desulfurase csd Rv3403c (family_assigned) — FAD/NAD(P)-binding protein Rv3403c Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT celA2b (family_assigned) — Probable cellulase CelA2b (endo-1,4-beta-glucanase celA2b lprJ (requalified) — lipoprotein LprJ lprJ Rv1004c (family_assigned) — hypothetical protein Rv1004c trxA (family_assigned) — thioredoxin family protein trxA trxB1 (requalified) — thioredoxin trxB1 echA12 (requalified) — enoyl-CoA hydratase echA12 sodC (family_assigned) — superoxide dismutase family protein sodC htpG (requalified) — molecular chaperone HtpG htpG grpE (requalified) — nucleotide exchange factor GrpE grpE dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 pirG (requalified) — exported repetitive protein pirG Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c egtC (requalified) — ergothioneine biosynthesis protein EgtC egtC egtD (requalified) — L-histidine N(alpha)-methyltransferase egtD Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 gshA (requalified) — ergothioneine biosynthesis glutamate--cysteine lig gshA etgB (requalified) — ergothioneine biosynthesis protein EgtB etgB sufC (requalified) — Fe-S cluster assembly ATPase SufC sufC sufD (requalified) — Fe-S cluster assembly protein SufD sufD sufB (requalified) — intein-containing Fe-S cluster assembly protein Su sufB rfbD (family_assigned) — ABC transporter permease rfbD Rv1466 (requalified) — metal-sulfur cluster assembly factor Rv1466 trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 Rv3404c (requalified) — dTDP-4-amino-4%2C6-dideoxyglucose formyltransferas Rv3404c PPE55 (family_assigned) — PPE family protein PPE55 PPE55 Rv2209 (requalified) — MFS transporter Rv2209 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 Rv3668c (requalified) — protease Rv3668c Rv0431 (requalified) — tuberculin-like peptide Rv0431 rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv3707c (requalified) — hypothetical protein Rv3707c ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv0039c (dark) — hypothetical protein Rv0039c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.