MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0886 · 46 genes shown · anchor gltB · open gene page → · ← back to 1 hop

Evidence: Min score 0
fprB (requalified) — FAD-dependent oxidoreductase fprB gltB (family_assigned) — glutamate synthase large subunit gltB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv0885 (requalified) — diiron oxygenase Rv0885 fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c fdxB (requalified) — fatty acid desaturase fdxB Rv3230c (requalified) — NADPH oxidoreductase Rv3230c kshB (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase reductase subuni kshB Rv2776c (requalified) — oxidoreductase Rv2776c mdh (requalified) — malate dehydrogenase mdh serC (requalified) — phosphoserine transaminase serC icd2 (requalified) — NADP-dependent isocitrate dehydrogenase icd2 gltD (family_assigned) — glutamate synthase subunit beta gltD fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c sepH (requalified) — septation protein SepH sepH Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c sirA (requalified) — sulfite reductase sirA cysH (requalified) — phosphoadenylyl-sulfate reductase cysH metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c aroF (requalified) — chorismate synthase aroF pta (requalified) — phosphate acetyltransferase pta sucD (family_assigned) — succinyl-CoA ligase subunit alpha sucD sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC Rv1465 (family_assigned) — SUF system NifU family Fe-S cluster assembly prote Rv1465 iscS (family_assigned) — cysteine desulfurase family protein iscS pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks12 (requalified) — type I polyketide synthase pks12 desA3 (requalified) — stearoyl-CoA 9-desaturase desA3 desA1 (requalified) — acyl-ACP desaturase DesA desA1 desA2 (requalified) — acyl-ACP desaturase desA2 kshA (family_assigned) — 3-ketosteroid-9-alpha-hydroxylase subunit KshA kshA kstD (requalified) — 3-oxosteroid 1-dehydrogenase kstD hsaC (requalified) — iron-dependent extradiol dioxygenase HsaC hsaC hsaA (family_assigned) — flavin-dependent monooxygenase oxygenase subunit H hsaA Rv3572 (family_assigned) — hypothetical protein Rv3572 cyp123 (requalified) — cytochrome P450 cyp123

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.