MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0883c · 46 genes shown · anchor serC · open gene page → · ← back to 1 hop

Evidence: Min score 0
sepH (requalified) — septation protein SepH sepH serC (requalified) — phosphoserine transaminase serC Rv0885 (requalified) — diiron oxygenase Rv0885 fprB (requalified) — FAD-dependent oxidoreductase fprB Rv1002c (requalified) — dolichyl-phosphate-mannose--protein mannosyltransf Rv1002c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2256c (dark) — hypothetical protein Rv2256c Rv3311 (family_assigned) — primosomal protein Rv3311 hbhA (requalified) — heparin-binding hemagglutinin HbhA hbhA Rv2772c (family_assigned) — hypothetical protein Rv2772c Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 thrC (requalified) — threonine synthase thrC serB2 (requalified) — phosphoserine phosphatase SerB serB2 Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3338 (family_assigned) — Conserved hypothetical protein Rv3338 Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c Rv0464c (family_assigned) — carboxymuconolactone decarboxylase family protein Rv0464c gltB (family_assigned) — glutamate synthase large subunit gltB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c fdxB (requalified) — fatty acid desaturase fdxB rsmI (requalified) — 16S rRNA (cytidine(1402)-2'-O)-methyltransferase rsmI Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rhlE (requalified) — DEAD/DEAH box helicase rhlE Rv3205c (family_assigned) — hypothetical protein Rv3205c lppL (family_assigned) — hypothetical protein lppL Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv2257c (family_assigned) — serine hydrolase domain-containing protein Rv2257c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2033c (family_assigned) — DUF3097 domain-containing protein Rv2033c sapM (requalified) — phosphatidylinositol-3-phosphatase sapM

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.