MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0882 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c lpqM (requalified) — neutral zinc metallopeptidase lpqM Rv2049c (family_assigned) — hypothetical protein Rv2049c Rv0431 (requalified) — tuberculin-like peptide Rv0431 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0250c (family_assigned) — hypothetical protein Rv0250c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv1486c (family_assigned) — hypothetical protein Rv1486c rsfS (requalified) — ribosome silencing factor rsfS rplQ (requalified) — 50S ribosomal protein L17 rplQ rplU (requalified) — 50S ribosomal protein L21 rplU Rv2175c (family_assigned) — DNA-binding protein Rv2175c Rv0744c (family_assigned) — helix-turn-helix domain-containing protein Rv0744c Rv0653c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0653c PPE13 (family_assigned) — PPE family protein PPE13 PPE13 lpqL (family_assigned) — M28 family metallopeptidase lpqL Rv2980 (dark) — DUF3515 domain-containing protein Rv2980 Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3311 (family_assigned) — primosomal protein Rv3311 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c napA (requalified) — DUF3263 domain-containing protein napA Rv0433 (requalified) — glutamate--cysteine ligase Rv0433 sodC (family_assigned) — superoxide dismutase family protein sodC Rv0434 (family_assigned) — LON peptidase substrate-binding domain-containing Rv0434 Rv2732c (family_assigned) — hypothetical protein Rv2732c lppL (family_assigned) — hypothetical protein lppL 35kd_ag (family_assigned) — hypothetical protein 35kd_ag pirG (requalified) — exported repetitive protein pirG chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3707c (requalified) — hypothetical protein Rv3707c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c cei (requalified) — envelope integrity protein Cei cei Rv2520c (dark) — DUF3618 domain-containing protein Rv2520c menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv0249c (family_assigned) — succinate dehydrogenase membrane anchor subunit Rv0249c Rv0248c (family_assigned) — fumarate reductase/succinate dehydrogenase flavopr Rv0248c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.