MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0877 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0877 (dark) — DUF3027 domain-containing protein Rv0877 Rv0875c (dark) — DUF2771 domain-containing protein Rv0875c Rv0876c (requalified) — MFS transporter Rv0876c Rv3662c (requalified) — oxidoreductase Rv3662c adnA (requalified) — ATP-dependent DNA helicase AdnA adnA Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c Rv2239c (family_assigned) — hypothetical protein Rv2239c Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c Rv1171 (family_assigned) — hypothetical protein Rv1171 dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX Rv0822c (family_assigned) — LCP family protein Rv0822c whiA (family_assigned) — DNA-binding protein WhiA whiA Rv3847 (requalified) — peptidase Rv3847 Rv3779 (family_assigned) — DUF6541 family protein Rv3779 prrB (requalified) — two-component system sensor histidine kinase PrrB prrB Rv1083 (dark) — hypothetical protein Rv1083 rseA (requalified) — anti-sigma E factor RseA rseA Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv1109c (requalified) — lipid droplet-associated protein Rv1109c dppD (family_assigned) — ABC transporter ATP-binding protein dppD dppC (family_assigned) — dipeptide ABC transporter permease DppC dppC dppB (family_assigned) — ABC transporter permease dppB dppA (family_assigned) — ABC transporter substrate-binding protein dppA Rv0487 (family_assigned) — YbjN domain-containing protein Rv0487 adnB (requalified) — ATP-dependent DNA helicase AdnB adnB uvrD2 (requalified) — ATP-dependent DNA helicase UvrD2 uvrD2 Rv2191 (family_assigned) — hypothetical protein Rv2191 nudC (requalified) — NAD(+) diphosphatase nudC radA (requalified) — DNA repair protein RadA radA Rv3200c (family_assigned) — potassium channel family protein Rv3200c rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2256c (dark) — hypothetical protein Rv2256c cei (requalified) — envelope integrity protein Cei cei ahpE (requalified) — peroxiredoxin AhpE ahpE Rv2240c (family_assigned) — hypothetical protein Rv2240c frr (requalified) — ribosome recycling factor frr Rv1626 (family_assigned) — ANTAR domain-containing response regulator Rv1626 rpsA (requalified) — 30S ribosomal protein S1 rpsA Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv0188 (requalified) — SPW repeat protein Rv0188 Rv3773c (family_assigned) — TIGR03086 family metal-binding protein Rv3773c mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.