MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0843 · 35 genes shown · anchor bkdB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC dlaT (requalified) — 2-oxoglutarate dehydrogenase%2C E2 component%2C di dlaT Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv1734c (family_assigned) — hypothetical protein Rv1734c Rv0842 (requalified) — MFS transporter Rv0842 lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC lpdA (requalified) — NAD(P)H-quinone dehydrogenase lpdA mtr (requalified) — mycothione reductase mtr Rv0794c (requalified) — oxidoreductase Rv0794c sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA aceE (requalified) — pyruvate dehydrogenase E1 component aceE accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 sucC (family_assigned) — ADP-forming succinate--CoA ligase subunit beta sucC garA (requalified) — glycogen accumulation regulator GarA garA Rv2209 (requalified) — MFS transporter Rv2209 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 gcvH (requalified) — glycine cleavage system protein GcvH gcvH glpD2 (requalified) — glycerol-3-phosphate dehydrogenase/oxidase glpD2 Rv2854 (family_assigned) — alpha/beta hydrolase Rv2854 nadE (requalified) — NAD(+) synthase nadE cobB (requalified) — NAD-dependent protein deacylase cobB pntB (family_assigned) — NAD(P)(+) transhydrogenase (Re/Si-specific) subuni pntB pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknA (requalified) — serine/threonine protein kinase PknA pknA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu rodA (requalified) — cell shape-determining peptidoglycan glycosyltrans rodA pbpA (requalified) — D%2CD-transpeptidase PbpA pbpA pknD (requalified) — serine/threonine protein kinase PknD pknD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.