MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0828c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0828c (requalified) — deaminase Rv0828c Rv0830 (requalified) — class I SAM-dependent methyltransferase Rv0830 kmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript kmtR hisE (requalified) — phosphoribosyl-ATP pyrophosphatase hisE xthA (requalified) — exodeoxyribonuclease III protein XthA xthA fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 fusA1 (requalified) — elongation factor G fusA1 birA (requalified) — biotin--[acetyl-CoA-carboxylase] ligase birA adhD (requalified) — NDMA-dependent alcohol dehydrogenase adhD adhE1 (family_assigned) — zinc-type alcohol dehydrogenase subunit E adhE1 adhB (requalified) — alcohol dehydrogenase B adhB mscR (requalified) — S-(hydroxymethyl)mycothiol dehydrogenase mscR pptT (requalified) — 4'-phosphopantetheinyl transferase pptT zur (requalified) — zinc uptake transcriptional repressor Zur zur embR (requalified) — response regulator transcription factor EmbR embR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 virS (family_assigned) — AraC family transcriptional regulator virS Rv1931c (family_assigned) — transcriptional regulator Rv1931c hisG (requalified) — ATP phosphoribosyltransferase hisG hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF hisD (requalified) — histidinol dehydrogenase hisD hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mutY (requalified) — A/G-specific adenine glycosylase mutY lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN end (requalified) — deoxyribonuclease IV end rplC (requalified) — 50S ribosomal protein L3 rplC rpsE (requalified) — 30S ribosomal protein S5 rpsE rplB (requalified) — 50S ribosomal protein L2 rplB rpsG (requalified) — 30S ribosomal protein S7 rpsG rplD (requalified) — 50S ribosomal protein L4 rplD rplE (requalified) — 50S ribosomal protein L5 rplE rpsL (requalified) — 30S ribosomal protein S12 rpsL tuf (requalified) — elongation factor Tu tuf accD5 (family_assigned) — acyl-CoA carboxylase subunit beta accD5 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 bioB (requalified) — biotin synthase BioB bioB bisC (requalified) — molybdopterin guanine dinucleotide-containing S/N- bisC accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 Rv1722 (requalified) — biotin carboxylase Rv1722

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.