MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0827c · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
kmtR (requalified) — Ni(II)/Co(II)-sensing metalloregulatory transcript kmtR zur (requalified) — zinc uptake transcriptional repressor Zur zur embR (requalified) — response regulator transcription factor EmbR embR oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv0377 (family_assigned) — LysR family transcriptional regulator Rv0377 virS (family_assigned) — AraC family transcriptional regulator virS Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c kdpE (requalified) — two-component system response regulator KdpE kdpE Rv0830 (requalified) — class I SAM-dependent methyltransferase Rv0830 Rv0828c (requalified) — deaminase Rv0828c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv2025c (family_assigned) — cation diffusion facilitator family transporter Rv2025c rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv0894 (family_assigned) — hypothetical protein Rv0894 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv2282c (family_assigned) — LysR family transcriptional regulator Rv2282c Rv0372c (family_assigned) — XdhC family protein Rv0372c Rv0368c (family_assigned) — VWA domain-containing protein Rv0368c Rv0375c (family_assigned) — carbon monoxyde dehydrogenase medium subunit Rv0375c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv1930c (requalified) — glutamine amidotransferase Rv1930c sigI (requalified) — RNA polymerase sigma factor SigI sigI cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv1359 (family_assigned) — transcriptional regulator Rv1359 kdpD (requalified) — sensor histidine kinase KdpD kdpD trcR (requalified) — two-component system response regulator TrcR trcR trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c pptT (requalified) — 4'-phosphopantetheinyl transferase pptT hisE (requalified) — phosphoribosyl-ATP pyrophosphatase hisE xthA (requalified) — exodeoxyribonuclease III protein XthA xthA fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.