MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0819 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
mshD (requalified) — mycothiol synthase mshD Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c mca (requalified) — mycothiol conjugate amidase Mca mca mltG (requalified) — endolytic transglycosylase MltG mltG Rv0360c (family_assigned) — hypothetical protein Rv0360c mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB phoT (family_assigned) — phosphate ABC transporter ATP-binding protein PstB phoT Rv2286c (family_assigned) — DsbA family protein Rv2286c lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 tcrY (requalified) — two component sensor kinase TcrY tcrY ppk2 (requalified) — polyphosphate kinase ppk2 ppa (requalified) — inorganic diphosphatase ppa mutT1 (requalified) — NUDIX hydrolase mutT1 Rv0496 (family_assigned) — hypothetical protein Rv0496 ppx2 (requalified) — exopolyphosphatase Ppx2 ppx2 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ cysE (requalified) — serine O-acetyltransferase cysE Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv2134c (dark) — hypothetical protein Rv2134c Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c Rv3195 (requalified) — zinc-dependent metalloprotease Rv3195 prpD (requalified) — 2-methylcitrate dehydratase prpD ilvB2 (family_assigned) — thiamine pyrophosphate-binding protein ilvB2 gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC Rv1083 (dark) — hypothetical protein Rv1083 Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c aroE (requalified) — shikimate dehydrogenase aroE alaS (requalified) — alanine--tRNA ligase alaS ruvX (requalified) — Holliday junction resolvase RuvX ruvX Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c eccE5 (family_assigned) — type VII secretion system ESX-5 subunit EccE5 eccE5 Rv0361 (family_assigned) — hypothetical protein Rv0361 Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.