MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0807 · 46 genes shown · anchor rbpA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0807 (family_assigned) — sterol carrier family protein Rv0807 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv2708c (family_assigned) — hypothetical protein Rv2708c Rv2206 (family_assigned) — DUF3043 domain-containing protein Rv2206 purF (requalified) — amidophosphoribosyltransferase purF Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv2146c (family_assigned) — YggT family protein Rv2146c Rv2696c (dark) — DUF3710 domain-containing protein Rv2696c Rv2699c (dark) — DUF4193 domain-containing protein Rv2699c whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv0525 (family_assigned) — histidine phosphatase family protein Rv0525 Rv0004 (requalified) — DNA replication protein DciA Rv0004 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2191 (family_assigned) — hypothetical protein Rv2191 dnaQ (family_assigned) — DEDDh family exonuclease dnaQ Rv2709 (dark) — DUF3099 domain-containing protein Rv2709 Rv2219 (family_assigned) — DUF4191 domain-containing protein Rv2219 Rv2731 (family_assigned) — DUF349 domain-containing protein Rv2731 cobT (requalified) — nicotinate-nucleotide--dimethylbenzimidazole phosp cobT cobS (requalified) — adenosylcobinamide-GDP ribazoletransferase cobS Rv2205c (requalified) — glycerate kinase Rv2205c Rv2204c (requalified) — iron-sulfur cluster assembly accessory protein Rv2204c purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purD (requalified) — phosphoribosylamine--glycine ligase purD purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB purH (requalified) — bifunctional phosphoribosylaminoimidazolecarboxami purH secG (family_assigned) — preprotein translocase subunit SecG secG whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2 Rv2147c (requalified) — cell division protein SepF Rv2147c wag31 (requalified) — cell wall synthesis protein Wag31 wag31 ftsZ (requalified) — cell division protein FtsZ ftsZ Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c Rv2256c (dark) — hypothetical protein Rv2256c Rv2698 (dark) — DUF3093 domain-containing protein Rv2698

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.