MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0801 · 46 genes shown · anchor pepC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0801 (family_assigned) — VOC family protein Rv0801 pepC (family_assigned) — M18 family aminopeptidase pepC Rv0799c (requalified) — Dyp-type peroxidase Rv0799c cfp29 (requalified) — family 1 encapsulin nanocompartment shell protein cfp29 Rv1727 (family_assigned) — TIGR03086 family metal-binding protein Rv1727 purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL Rv0360c (family_assigned) — hypothetical protein Rv0360c whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv2560 (family_assigned) — DUF2189 domain-containing protein Rv2560 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA lpqE (family_assigned) — hypothetical protein lpqE tatB (requalified) — Sec-independent protein translocase protein TatB tatB plcB (requalified) — membrane-associated phospholipase B plcB plcC (requalified) — phospholipase C plcC uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC Rv1726 (requalified) — FAD-binding oxidoreductase Rv1726 Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c Rv1724c (dark) — hypothetical protein Rv1724c Rv1749c (family_assigned) — DUF6790 family protein Rv1749c purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ Rv0787A (family_assigned) — hypothetical protein Rv0787A purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purN (requalified) — phosphoribosylglycinamide formyltransferase purN purF (requalified) — amidophosphoribosyltransferase purF purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT mca (requalified) — mycothiol conjugate amidase Mca mca Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv0361 (family_assigned) — hypothetical protein Rv0361 mshD (requalified) — mycothiol synthase mshD Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 sigA (requalified) — RNA polymerase sigma factor sigA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ embR (requalified) — response regulator transcription factor EmbR embR mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.