MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0799c · 46 genes shown · anchor pepC · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0799c (requalified) — Dyp-type peroxidase Rv0799c cfp29 (requalified) — family 1 encapsulin nanocompartment shell protein cfp29 pepC (family_assigned) — M18 family aminopeptidase pepC Rv0801 (family_assigned) — VOC family protein Rv0801 lpqE (family_assigned) — hypothetical protein lpqE purL (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purL tatB (requalified) — Sec-independent protein translocase protein TatB tatB tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA tatC (family_assigned) — twin-arginine translocase subunit TatC tatC Rv0669c (requalified) — neutral ceramidase Rv0669c gadB (requalified) — glutamate decarboxylase gadB hemY (requalified) — protoporphyrinogen oxidase hemY folB (requalified) — dihydroneopterin aldolase folB plcB (requalified) — membrane-associated phospholipase B plcB plcC (requalified) — phospholipase C plcC uvrC (family_assigned) — excinuclease ABC subunit UvrC uvrC clpP1 (family_assigned) — ATP-dependent CLP protease proteolytic subunit 1 clpP1 gatA (family_assigned) — Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase subun gatA Rv1727 (family_assigned) — TIGR03086 family metal-binding protein Rv1727 Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv2876 (requalified) — transmembrane protein Rv2876 ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrA (requalified) — hypothetical protein qcrA ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC qcrC (requalified) — cytochrome c qcrC qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB purQ (family_assigned) — phosphoribosylformylglycinamidine synthase subunit purQ Rv0787A (family_assigned) — hypothetical protein Rv0787A purM (requalified) — phosphoribosylformylglycinamidine cyclo-ligase purM purN (requalified) — phosphoribosylglycinamide formyltransferase purN purF (requalified) — amidophosphoribosyltransferase purF purT (requalified) — phosphoribosylglycinamide formyltransferase 2 purT htrA (requalified) — serine protease HtrA htrA guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA rseA (requalified) — anti-sigma E factor RseA rseA Rv1337 (family_assigned) — rhomboid family intramembrane serine protease Rv1337 sigE (requalified) — RNA polymerase sigma factor SigE sigE pafA (requalified) — Pup--protein ligase pafA pafB (family_assigned) — YafY family protein pafB pafC (family_assigned) — YafY family protein pafC helY (requalified) — RNA helicase helY Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c nagA (requalified) — N-acetylglucosamine-6-phosphate deacetylase nagA end (requalified) — deoxyribonuclease IV end zwf2 (requalified) — glucose-6-phosphate dehydrogenase zwf2 zwf1 (requalified) — glucose-6-phosphate 1-dehydrogenase zwf1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.