MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0775 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0775 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0775 Rv2360c (family_assigned) — hypothetical protein Rv2360c Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1486c (family_assigned) — hypothetical protein Rv1486c Rv1632c (family_assigned) — DUF402 domain-containing protein Rv1632c Rv0774c (requalified) — iron-stress inducible esterase Rv0774c Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv2732c (family_assigned) — hypothetical protein Rv2732c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv2446c (dark) — DUF4233 domain-containing protein Rv2446c lppL (family_assigned) — hypothetical protein lppL Rv1109c (requalified) — lipid droplet-associated protein Rv1109c Rv0481c (family_assigned) — DUF2505 domain-containing protein Rv0481c Rv2361c (requalified) — decaprenyl diphosphate synthase Rv2361c recO (requalified) — DNA repair protein RecO recO amiA2 (requalified) — amidase amiA2 Rv0497 (family_assigned) — hypothetical protein Rv0497 mmr (requalified) — multidrug resistance protein Mmr mmr Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv1488 (family_assigned) — SPFH domain-containing protein Rv1488 Rv1489 (family_assigned) — hypothetical protein Rv1489 Rv2743c (family_assigned) — hypothetical protein Rv2743c rsbW (requalified) — anti-sigma B factor RsbW rsbW lpqW (requalified) — lipoarabinomannan biosynthesis protein LpqW lpqW Rv3438 (family_assigned) — alpha/beta hydrolase Rv3438 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 ggtA (requalified) — bifunctional cephalosporin acylase/gamma-glutamylt ggtA Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c glnX (requalified) — protein kinase G-activating protein GlnX glnX eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 adhB (requalified) — alcohol dehydrogenase B adhB menD (requalified) — 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1 menD bpoC (family_assigned) — alpha/beta hydrolase bpoC mgtA (requalified) — GDP-mannose-dependent alpha-mannosyltransferase mgtA miaB (requalified) — tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiot miaB Rv3205c (family_assigned) — hypothetical protein Rv3205c rhlE (requalified) — DEAD/DEAH box helicase rhlE folC (requalified) — bifunctional tetrahydrofolate synthase/dihydrofola folC valS (requalified) — valine--tRNA ligase valS Rv0863 (family_assigned) — hypothetical protein Rv0863 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0996 (family_assigned) — hypothetical protein Rv0996

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.