MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0753c · 40 genes shown · anchor mmsB · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmsA (requalified) — CoA-acylating methylmalonate-semialdehyde dehydrog mmsA mmsB (requalified) — 3-hydroxyisobutyrate dehydrogenase mmsB fadE9 (family_assigned) — acyl-CoA dehydrogenase family protein fadE9 acs (requalified) — acetate--CoA ligase acs gabT (requalified) — 4-aminobutyrate--2-oxoglutarate transaminase gabT aldA (requalified) — aldehyde dehydrogenase aldA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 fadB (requalified) — fatty oxidation protein FadB fadB pta (requalified) — phosphate acetyltransferase pta Rv0914c (requalified) — acetyl-CoA acetyltransferase Rv0914c fadA (requalified) — acetyl-CoA C-acetyltransferase fadA Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 echA9 (family_assigned) — enoyl-CoA hydratase/isomerase family protein echA9 fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA gltA2 (requalified) — citrate synthase gltA2 prpC (requalified) — 2-methylcitrate synthase prpC citA (requalified) — citrate synthase 2 citA glcB (requalified) — malate synthase G glcB pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd gabD1 (requalified) — succinate-semialdehyde dehydrogenase gabD1 gabD2 (requalified) — succinic semialdehyde dehydrogenase gabD2 Rv0765c (family_assigned) — SDR family oxidoreductase Rv0765c Rv0770 (requalified) — NAD(P)-dependent oxidoreductase Rv0770 adhB (requalified) — alcohol dehydrogenase B adhB cyp123 (requalified) — cytochrome P450 cyp123 cyp51 (requalified) — lanosterol 14-alpha demethylase cyp51 ackA (requalified) — acetate kinase ackA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c bkdC (family_assigned) — dihydrolipoamide acetyltransferase family protein bkdC Rv2454c (family_assigned) — 2-oxoacid:ferredoxin oxidoreductase subunit beta Rv2454c Rv0913c (family_assigned) — carotenoid oxygenase family protein Rv0913c fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadB3 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB fadB3 leuA (requalified) — 2-isopropylmalate synthase leuA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.