MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0730 · 46 genes shown · anchor xylB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB xylB (requalified) — FGGY-family carbohydrate kinase xylB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH pepE (family_assigned) — Xaa-Pro peptidase family protein pepE serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fucA (requalified) — L-fuculose-phosphate aldolase fucA rpsS (requalified) — 30S ribosomal protein S19 rpsS pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT nusA (requalified) — transcription termination factor NusA nusA fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu lysX (requalified) — bifunctional lysine--tRNA ligase/phosphatidylglyce lysX lysS (requalified) — lysine--tRNA ligase lysS gyrA (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit A gyrA mfpA (requalified) — pentapeptide repeat protein MfpA mfpA recF (requalified) — DNA replication/repair protein RecF recF dnaN (family_assigned) — DNA polymerase III subunit beta dnaN Rv0004 (requalified) — DNA replication protein DciA Rv0004 rpe (requalified) — ribulose-phosphate 3-epimerase rpe Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv1006 (family_assigned) — hypothetical protein Rv1006 atpF (family_assigned) — F0F1 ATP synthase subunit B atpF atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA atpD (family_assigned) — F0F1 ATP synthase subunit beta atpD atpC (family_assigned) — F0F1 ATP synthase subunit epsilon atpC atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv2090 (requalified) — 5'-3' exonuclease Rv2090 nadE (requalified) — NAD(+) synthase nadE Rv0480c (family_assigned) — carbon-nitrogen hydrolase family protein Rv0480c serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 trpS (requalified) — tryptophan--tRNA ligase trpS serC (requalified) — phosphoserine transaminase serC gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 tpi (requalified) — triose-phosphate isomerase tpi fba (requalified) — class II fructose-bisphosphate aldolase fba citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE Rv3075c (requalified) — CoA ester lyase Rv3075c rpsH (requalified) — 30S ribosomal protein S8 rpsH rplS (requalified) — 50S ribosomal protein L19 rplS rplB (requalified) — 50S ribosomal protein L2 rplB rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplP (requalified) — 50S ribosomal protein L16 rplP rpsF (requalified) — 30S ribosomal protein S6 rpsF pheS (family_assigned) — phenylalanine--tRNA ligase subunit alpha pheS leuS (requalified) — leucine--tRNA ligase leuS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.