MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0727c · 46 genes shown · anchor serA2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fucA (requalified) — L-fuculose-phosphate aldolase fucA serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 tpi (requalified) — triose-phosphate isomerase tpi xylB (requalified) — FGGY-family carbohydrate kinase xylB fba (requalified) — class II fructose-bisphosphate aldolase fba citE (family_assigned) — citrate (pro-3S)-lyase subunit beta citE Rv3075c (requalified) — CoA ester lyase Rv3075c Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv1973 (family_assigned) — hypothetical protein Rv1973 Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv3492c (requalified) — Mce associated protein Rv3492c Rv1363c (dark) — hypothetical protein Rv1363c serC (requalified) — phosphoserine transaminase serC gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 pgk (requalified) — phosphoglycerate kinase pgk gap (requalified) — type I glyceraldehyde-3-phosphate dehydrogenase gap pgi (requalified) — glucose-6-phosphate isomerase pgi eno (requalified) — phosphopyruvate hydratase eno rpe (requalified) — ribulose-phosphate 3-epimerase rpe Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c Rv1006 (family_assigned) — hypothetical protein Rv1006 pfkA (requalified) — ATP-dependent 6-phosphofructokinase pfkA tkt (requalified) — transketolase tkt Rv2499c (family_assigned) — MaoC family dehydratase Rv2499c accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 accD1 (family_assigned) — acetyl-/propionyl-CoA carboxylase subunit beta accD1 scoB (family_assigned) — succinyl-CoA--3-ketoacid CoA transferase subunit B scoB Rv3076 (family_assigned) — SRPBCC family protein Rv3076 hab (requalified) — hydrogenase hab Rv2286c (family_assigned) — DsbA family protein Rv2286c Rv3073c (dark) — DUF488 domain-containing protein Rv3073c gyrB (family_assigned) — DNA topoisomerase (ATP-hydrolyzing) subunit B gyrB atpH (family_assigned) — F0F1 ATP synthase subunit B/delta atpH pepE (family_assigned) — Xaa-Pro peptidase family protein pepE mce3F (family_assigned) — MlaD family protein mce3F mce3C (family_assigned) — virulence factor Mce family protein mce3C lprM (family_assigned) — Mce family lipoprotein LprM lprM mce3A (family_assigned) — Mce family protein Mce3A mce3A mce3D (family_assigned) — virulence factor Mce family protein mce3D Rv1975 (family_assigned) — CAP domain-containing protein Rv1975 Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv0176 (family_assigned) — RDD family protein Rv0176 Rv0177 (requalified) — Mce associated protein Rv0177

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.