MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0725c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0725c (family_assigned) — hypothetical protein Rv0725c Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 Rv0726c (requalified) — class I SAM-dependent methyltransferase Rv0726c pptT (requalified) — 4'-phosphopantetheinyl transferase pptT serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 metK (requalified) — S-adenosylmethionine synthetase metK metB (requalified) — cystathionine gamma-synthase metB adhB (requalified) — alcohol dehydrogenase B adhB umaA (requalified) — mycolic acid synthase UmaA umaA trmI (requalified) — tRNA (adenine(58)-N(1))-methyltransferase TrmI trmI serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 Rv2750 (family_assigned) — Rv2750 family mycofactocin-dependent SDR oxidoredu Rv2750 Rv2749 (family_assigned) — putative quinol monooxygenase Rv2749 Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c Rv3767c (requalified) — class I SAM-dependent methyltransferase Rv3767c Rv0893c (requalified) — class I SAM-dependent methyltransferase Rv0893c Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 fucA (requalified) — L-fuculose-phosphate aldolase fucA whiB6 (family_assigned) — transcriptional regulator WhiB6 whiB6 rnj (requalified) — ribonuclease J rnj Rv2795c (requalified) — metallophosphoesterase Rv2795c truB (requalified) — tRNA pseudouridine(55) synthase TruB truB mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ltp1 (requalified) — lipid-transfer protein ltp1 pks13 (requalified) — polyketide synthase Pks13 pks13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 serC (requalified) — phosphoserine transaminase serC gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 xylB (requalified) — FGGY-family carbohydrate kinase xylB Rv0730 (requalified) — GCN5-like N-acetyltransferase Rv0730 ribH (requalified) — 6%2C7-dimethyl-8-ribityllumazine synthase ribH metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE mscL (requalified) — large-conductance mechanosensitive channel protein mscL metH (requalified) — methionine synthase metH mmuM (requalified) — homocysteine S-methyltransferase mmuM gmk (requalified) — guanylate kinase gmk cbs (requalified) — cystathionine beta-synthase cbs cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 Rv3684 (requalified) — lyase Rv3684 metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC Rv0760c (family_assigned) — ketosteroid isomerase family protein Rv0760c aldA (requalified) — aldehyde dehydrogenase aldA Rv0147 (requalified) — aldehyde dehydrogenase Rv0147 pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c Rv0458 (family_assigned) — aldehyde dehydrogenase family protein Rv0458

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.