MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0677c · 46 genes shown · anchor mmpL5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
mmpS5 (requalified) — siderophore transporter accessory protein MmpS5 mmpS5 mmpL5 (requalified) — siderophore RND transporter MmpL5 mmpL5 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 raaS (family_assigned) — transcriptional regulator RaaS raaS Rv1217c (family_assigned) — multidrug efflux ABC transporter permease Rv1217c mmpL4 (requalified) — transmembrane transport protein MmpL4 mmpL4 mmpL9 (requalified) — RND transporter MmpL9 mmpL9 Rv1049 (requalified) — oxidation-sensing regulator MosR Rv1049 Rv0455c (family_assigned) — DUF5078 domain-containing protein Rv0455c Rv0880 (family_assigned) — MarR family transcriptional regulator Rv0880 mmpS4 (requalified) — siderophore RND transporter accessory protein MmpS mmpS4 irtA (family_assigned) — iron ABC transporter ATP-binding protein/permease irtA atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv3160c (family_assigned) — helix-turn-helix domain-containing protein Rv3160c Rv1598c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1598c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1303 (family_assigned) — ATP synthase subunit I Rv1303 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv1216c (family_assigned) — isoprenylcysteine carboxylmethyltransferase family Rv1216c Rv1215c (family_assigned) — CocE/NonD family hydrolase Rv1215c Rv1220c (requalified) — methyltransferase Rv1220c Rv1686c (family_assigned) — ABC transporter permease Rv1686c Rv0449c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0449c lppX (requalified) — LppX_LprAFG lipoprotein lppX Rv0128 (family_assigned) — YoaK family protein Rv0128 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv1050 (family_assigned) — SDR family oxidoreductase Rv1050 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv1048c (dark) — hypothetical protein Rv1048c sigI (requalified) — RNA polymerase sigma factor SigI sigI echA2 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA2 Rv0457c (family_assigned) — prolyl oligopeptidase family protein Rv0457c Rv0397A (dark) — hypothetical protein Rv0397A Rv0559c (family_assigned) — DUF732 domain-containing protein Rv0559c Rv0338c (requalified) — heterodisulfide reductase-related iron-sulfur bind Rv0338c gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv0882 (dark) — DUF2537 domain-containing protein Rv0882 Rv0881 (requalified) — RNA methyltransferase Rv0881 Rv0879c (family_assigned) — DUF2530 domain-containing protein Rv0879c Rv2175c (family_assigned) — DNA-binding protein Rv2175c Rv0744c (family_assigned) — helix-turn-helix domain-containing protein Rv0744c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.