MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0674 · 46 genes shown · anchor echA4 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv0674 (family_assigned) — PaaX family transcriptional regulator C-terminal d Rv0674 echA4 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA4 echA5 (requalified) — enoyl-CoA hydratase EchA5 echA5 fadE8 (family_assigned) — acyl-CoA dehydrogenase family protein fadE8 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c moxR2 (family_assigned) — MoxR family ATPase moxR2 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c cobB (requalified) — NAD-dependent protein deacylase cobB Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadB2 (requalified) — 3-hydroxybutyryl-CoA dehydrogenase FadB2 fadB2 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadB (requalified) — fatty oxidation protein FadB fadB end (requalified) — deoxyribonuclease IV end fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB Rv0272c (family_assigned) — alpha/beta hydrolase Rv0272c Rv0274 (family_assigned) — VOC family protein Rv0274 trcR (requalified) — two-component system response regulator TrcR trcR moxR3 (family_assigned) — MoxR family ATPase moxR3 Rv3693 (family_assigned) — DUF58 domain-containing protein Rv3693 Rv3691 (family_assigned) — hypothetical protein Rv3691 Rv1453 (family_assigned) — PucR family transcriptional regulator Rv1453 phoY1 (requalified) — phosphate signaling complex protein PhoU phoY1 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR Rv1359 (family_assigned) — transcriptional regulator Rv1359 embR (requalified) — response regulator transcription factor EmbR embR Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c mftB (requalified) — mycofactocin biosynthesis chaperone MftB mftB mftC (requalified) — mycofactocin radical SAM maturase mftC Rv0690c (family_assigned) — DUF2332 domain-containing protein Rv0690c Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv1724c (dark) — hypothetical protein Rv1724c sigI (requalified) — RNA polymerase sigma factor SigI sigI

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.