MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv0667 · 41 genes shown · anchor rpoC · open gene page → · ← back to 1 hop

Evidence: Min score 0
rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA sigA (requalified) — RNA polymerase sigma factor sigA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL carD (requalified) — RNA polymerase-binding transcription factor CarD carD sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH rplK (requalified) — 50S ribosomal protein L11 rplK rplF (requalified) — 50S ribosomal protein L6 rplF rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsE (requalified) — 30S ribosomal protein S5 rpsE whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR rslA (requalified) — anti-sigma-L factor RslA rslA mapA (requalified) — methionine aminopeptidase mapA rshA (requalified) — anti-sigma factor RshA rshA Rv3222c (family_assigned) — hypothetical protein Rv3222c rplR (requalified) — 50S ribosomal protein L18 rplR rplJ (requalified) — 50S ribosomal protein L10 rplJ rplY (requalified) — 50S ribosomal protein L25/general stress protein C rplY rpsF (requalified) — 30S ribosomal protein S6 rpsF Rv0500B (family_assigned) — Conserved hypothetical protein Rv0500B rplA (requalified) — 50S ribosomal protein L1 rplA rpsD (requalified) — 30S ribosomal protein S4 rpsD rplW (requalified) — 50S ribosomal protein L23 rplW rpsG (requalified) — 30S ribosomal protein S7 rpsG rplS (requalified) — 50S ribosomal protein L19 rplS rpsR1 (requalified) — 30S ribosomal protein S18 rpsR1 rplB (requalified) — 50S ribosomal protein L2 rplB rpsP (requalified) — 30S ribosomal protein S16 rpsP rplC (requalified) — 50S ribosomal protein L3 rplC rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.